Package: BCClong 1.0.3

BCClong: Bayesian Consensus Clustering for Multiple Longitudinal Features

It is very common nowadays for a study to collect multiple features and appropriately integrating multiple longitudinal features simultaneously for defining individual clusters becomes increasingly crucial to understanding population heterogeneity and predicting future outcomes. 'BCClong' implements a Bayesian consensus clustering (BCC) model for multiple longitudinal features via a generalized linear mixed model. Compared to existing packages, several key features make the 'BCClong' package appealing: (a) it allows simultaneous clustering of mixed-type (e.g., continuous, discrete and categorical) longitudinal features, (b) it allows each longitudinal feature to be collected from different sources with measurements taken at distinct sets of time points (known as irregularly sampled longitudinal data), (c) it relaxes the assumption that all features have the same clustering structure by estimating the feature-specific (local) clusterings and consensus (global) clustering.

Authors:Zhiwen Tan [aut, cre], Zihang Lu [ctb], Chang Shen [ctb]

BCClong_1.0.3.tar.gz
BCClong_1.0.3.zip(r-4.5)BCClong_1.0.3.zip(r-4.4)BCClong_1.0.3.zip(r-4.3)
BCClong_1.0.3.tgz(r-4.4-x86_64)BCClong_1.0.3.tgz(r-4.4-arm64)BCClong_1.0.3.tgz(r-4.3-x86_64)BCClong_1.0.3.tgz(r-4.3-arm64)
BCClong_1.0.3.tar.gz(r-4.5-noble)BCClong_1.0.3.tar.gz(r-4.4-noble)
BCClong_1.0.3.tgz(r-4.4-emscripten)BCClong_1.0.3.tgz(r-4.3-emscripten)
BCClong.pdf |BCClong.html
BCClong/json (API)

# Install 'BCClong' in R:
install.packages('BCClong', repos = c('https://zhiwent.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/zhiwent/bcclong/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library
Datasets:

On CRAN:

5.26 score 3 stars 10 scripts 255 downloads 5 exports 59 dependencies

Last updated 5 months agofrom:1b50efcdc7. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 23 2024
R-4.5-win-x86_64OKNov 23 2024
R-4.5-linux-x86_64OKNov 23 2024
R-4.4-win-x86_64OKNov 23 2024
R-4.4-mac-x86_64OKNov 23 2024
R-4.4-mac-aarch64OKNov 23 2024
R-4.3-win-x86_64OKNov 23 2024
R-4.3-mac-x86_64OKNov 23 2024
R-4.3-mac-aarch64OKNov 23 2024

Exports:BayesTBCC.multimodel.selection.criteriatraceplottrajplot

Dependencies:abindbootcliclustercodacolorspacecombinatevdfansifarverfastGHQuadggplot2gluegmpgridExtragtableisobandlabel.switchinglabelingLaplacesDemonlatticelifecyclelme4lpSolvemagrittrMASSMatrixMatrixModelsmclustmcmcMCMCpackmgcvminqamixAKmnormtmunsellmvtnormnlmenloptrnnetpillarpkgconfigquantregR6RColorBrewerRcppRcppArmadilloRcppEigenrlangRmpfrscalesSparseMsurvivaltibbletruncdistutf8vctrsviridisLitewithr

ContinuousData

Rendered fromContinuousData.Rmdusingknitr::rmarkdownon Nov 23 2024.

Last update: 2024-06-23
Started: 2022-09-29

MixedTypeData

Rendered fromMixedTypeData.Rmdusingknitr::rmarkdownon Nov 23 2024.

Last update: 2024-06-23
Started: 2022-09-29